Results
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| Property | Organism | Value | Units | ID | Details |
|---|---|---|---|---|---|
| Naive & memory lymphocytes divide every: | Human Homo sapiens | naive lymphocytes 3.5 years: memory lymphocytes 22 weeks: Table - link | N/A | 111622 | Mclean AR, Michie CA.... |
| Cultivation temperature memory time scale | Nematode Caenorhabditis elegans | 1.6-1.8 | hours | 100911 | Ramot D, MacInnis BL... |
| Burst size in lymphoid memory T cell (in vitro) | HIV | 1400 isolated cells: 2450 cells remixed with tissue | virions/cell | 105872 | Eckstein DA. et al.,... |
| DNA repair protein Ku80 diffusion coefficient | Human Homo sapiens | 0.35-14.7 Table - link | µm^2/sec | 110963 | Bendtsen KM et al., Dynamics... |
| Duration of reconsolidation (during which memory trace becomes labile and subject to long term revision by psychological processes) | Human Homo sapiens | 5 minutes to 1 hour | N/A | 113185 | Post RM, Kegan R. Prevention... |
| Half-time for repair of dehydratase clusters | Bacteria Escherichia coli | ~5 | min | 112946 | Imlay JA. The molecular... |
| Number of DNA repair enzymes and frequency of damaged bases excised | Bacteria Escherichia coli | ~10^5 repair enzymes/cell: Excised damaged bases are 1 every 10^6 bp | N/A | 113298 | Pollak AJ, Chin AT, Reich... |
| Antigen-specific memory B-cell frequencies estimated using polyclonal activation and EBV-B-cell immortalization | Human Homo sapiens | Table - link | N/A | 110222 | Pinna D, Corti D, Jarrossay D... |
| Burst size in lymphoid memory T cell (in vitro) | HIV | 570 after 1.5 days of culture: 780 after 3.5 days | virions/cell | 105871 | Eckstein DA, Penn ML... |
| Half-time of DNA repair of single-strand breaks (SSB) and double-strand breaks (DSB) | Human Homo sapiens | SSB a few minutes: DSB >1 hour | N/A | 112195 | Collins AR, Ma AG, Duthie... |
| Mixing time (after which cells lose the memory of their previous protein state) | Bacteria Escherichia coli | 1 to 2 | Hours | 107861 | Sigal A et al., Variability... |
| Number of ATP molecules that may be required for repair of a single double-strand break (used in signaling, the generation of repair foci, and the formation of the RAD51 nucleofilament) | Unspecified | >10^4 | ATP molecules | 112972 | Hoeijmakers JH. DNA damage... |
| Fraction of the DSB repair events in mitotic cells that result in a crossover | Budding yeast Saccharomyces cerevisiae | ~10 to 15 | % | 107333 | Agmon N, Yovel M, Harari Y... |
| DNA replication rate of DNA polymerase II (slow-dna repair) | Bacteria Escherichia coli | 20-30 | nucleotides/sec | 104125 | Bonner CA, Stukenberg PT... |
| Plasmodesmal permeability of a single epidermal cell wall | Thale cress Arabidopsis thaliana | 3.3 (±0.8) | μm^2/sec | 107797 | Rutschow HL, Baskin TI... |
| Relative amount of secreted oxidized DNA bases (likely a reporter for organism wide DNA damage repair) between mouse and humans | Human Homo sapiens | 18 | fold difference | 105255 | Adelman R, Saul RL, Ames... |
| Plasmid replicons and compatibility | Bacteria Escherichia coli | Table - link | Copies/cell | 107527 | Novagen, User Protocol... |
| Number of pET (all), pETDuet-1 plasmids per cell | Bacteria Escherichia coli | ~40 Table - link | Copies/cell | 107528 | Novagen, User Protocol... |
| Number of pACYCDuet-1, pLysS, pLysE, pLacI, pRARE, pRARE-2 plasmids per cell | Bacteria Escherichia coli | 10 to 12 Table - link | Copies/cell | 107529 | Novagen, User Protocol... |
| Number of pCDFDuet™-1, pCDF plasmids per cell | Bacteria Escherichia coli | 20 to 40 Table - link | Copies/cell | 107530 | Novagen, User Protocol... |